STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amdhd2Amidohydrolase domain containing 2. (406 aa)    
Predicted Functional Partners:
gnpda2
Glucosamine-6-phosphate deaminase 2.
 0.995
gnpda1
Glucosamine-6-phosphate deaminase 1.
 0.995
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 0.988
pgls
6-phosphogluconolactonase.
  
 0.978
gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
  
 
 0.952
gfpt2
Glutamine-fructose-6-phosphate transaminase 2.
    
 0.947
pigl
Phosphatidylinositol glycan anchor biosynthesis class L.
    
 0.940
gpi
Glucose-6-phosphate isomerase.
    
 0.938
LOC114645040
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1-like.
    
 0.934
nagk
N-acetylglucosamine kinase.
    
 0.933
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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