Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSECRP00000000849 | klf4 | ENSECRP00000000849 | ENSECRP00000023841 | annotation not available | Kruppel like factor 4. | 0.527 |
ENSECRP00000002222 | klf4 | ENSECRP00000002222 | ENSECRP00000023841 | annotation not available | Kruppel like factor 4. | 0.506 |
ENSECRP00000011256 | klf4 | ENSECRP00000011256 | ENSECRP00000023841 | annotation not available | Kruppel like factor 4. | 0.603 |
ENSECRP00000011256 | rel | ENSECRP00000011256 | ENSECRP00000030511 | annotation not available | REL proto-oncogene, NF-kB subunit. | 0.699 |
ENSECRP00000011256 | rela | ENSECRP00000011256 | ENSECRP00000001024 | annotation not available | RELA proto-oncogene, NF-kB subunit. | 0.699 |
ENSECRP00000011256 | relb | ENSECRP00000011256 | ENSECRP00000000062 | annotation not available | RELB proto-oncogene, NF-kB subunit. | 0.699 |
ENSECRP00000011256 | rps27a | ENSECRP00000011256 | ENSECRP00000026007 | annotation not available | Ribosomal protein S27a. | 0.474 |
LOC114658153 | klf4 | ENSECRP00000019931 | ENSECRP00000023841 | POU domain, class 5, transcription factor 1-like. | Kruppel like factor 4. | 0.506 |
klf4 | ENSECRP00000000849 | ENSECRP00000023841 | ENSECRP00000000849 | Kruppel like factor 4. | annotation not available | 0.527 |
klf4 | ENSECRP00000002222 | ENSECRP00000023841 | ENSECRP00000002222 | Kruppel like factor 4. | annotation not available | 0.506 |
klf4 | ENSECRP00000011256 | ENSECRP00000023841 | ENSECRP00000011256 | Kruppel like factor 4. | annotation not available | 0.603 |
klf4 | LOC114658153 | ENSECRP00000023841 | ENSECRP00000019931 | Kruppel like factor 4. | POU domain, class 5, transcription factor 1-like. | 0.506 |
klf4 | nfkb1 | ENSECRP00000023841 | ENSECRP00000018355 | Kruppel like factor 4. | Nuclear factor kappa B subunit 1. | 0.594 |
klf4 | nfkb2 | ENSECRP00000023841 | ENSECRP00000016961 | Kruppel like factor 4. | Nuclear factor kappa B subunit 2. | 0.594 |
klf4 | rel | ENSECRP00000023841 | ENSECRP00000030511 | Kruppel like factor 4. | REL proto-oncogene, NF-kB subunit. | 0.569 |
klf4 | rela | ENSECRP00000023841 | ENSECRP00000001024 | Kruppel like factor 4. | RELA proto-oncogene, NF-kB subunit. | 0.569 |
klf4 | relb | ENSECRP00000023841 | ENSECRP00000000062 | Kruppel like factor 4. | RELB proto-oncogene, NF-kB subunit. | 0.569 |
klf4 | rps27a | ENSECRP00000023841 | ENSECRP00000026007 | Kruppel like factor 4. | Ribosomal protein S27a. | 0.566 |
nfkb1 | klf4 | ENSECRP00000018355 | ENSECRP00000023841 | Nuclear factor kappa B subunit 1. | Kruppel like factor 4. | 0.594 |
nfkb1 | nfkb2 | ENSECRP00000018355 | ENSECRP00000016961 | Nuclear factor kappa B subunit 1. | Nuclear factor kappa B subunit 2. | 0.860 |
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