STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc12a2Solute carrier family 12 member 2. (1159 aa)    
Predicted Functional Partners:
LOC114662354
Uncharacterized LOC114662354.
  
 0.647
tk2
Thymidine kinase 2.
   
  0.624
nt5e
5'-nucleotidase ecto.
   
  0.621
nudt12
Nudix hydrolase 12.
   
 0.620
adcy3
Adenylate cyclase 3.
    
 0.596
nme6
NME/NM23 nucleoside diphosphate kinase 6.
  
 
  0.593
dtymk
Deoxythymidylate kinase.
    
  0.591
tk1
Thymidine kinase 1.
   
 
  0.589
itpa
Inosine triphosphatase.
    
  0.589
adcy9
Adenylate cyclase 9.
  
 
  0.588
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.