STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrasMuscle RAS oncogene homolog. (208 aa)    
Predicted Functional Partners:
shoc2
SHOC2 leucine rich repeat scaffold protein.
    
 0.976
lrrd1
Leucine rich repeats and death domain containing 1.
    
 0.976
pik3cb
Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta.
   
 0.949
pik3cd
Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta.
   
 0.949
nf1
Neurofibromin 1.
    
 0.941
LOC114648904
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform-like.
   
 0.941
pik3ca
Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha.
   
 0.941
LOC114660611
Serine/threonine-protein kinase A-Raf-like.
  
 0.933
ralbp1
ralA binding protein 1.
    
 0.930
afdn
Afadin, adherens junction formation factor.
    
 0.927
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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