STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
washc5WASH complex subunit 5. (1159 aa)    
Predicted Functional Partners:
washc4
WASH complex subunit 4.
  
 0.996
washc1
WASH complex subunit 1.
   
 0.994
washc3
WASH complex subunit 3.
    
 0.993
LOC114647272
WASH complex subunit 2-like.
   
 0.992
snx27
Sorting nexin 27.
    
 0.965
rcsd1
RCSD domain containing 1.
   
 0.951
dnajc13
DnaJ heat shock protein family (Hsp40) member C13.
   
 
 0.939
capzb
Capping actin protein of muscle Z-line subunit beta.
    
 0.898
ENSECRP00000031904
annotation not available
    
 0.898
snx17
Sorting nexin 17.
    
 0.845
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.