STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clec19aC-type lectin domain containing 19A. (177 aa)    
Predicted Functional Partners:
syt17
Synaptotagmin 17.
 
   
 0.750
LOC114663226
Killer cell lectin-like receptor subfamily G member 1.
    
 0.731
LOC114667991
TYRO protein tyrosine kinase-binding protein-like.
    
 0.592
ENSECRP00000005502
annotation not available
    
  0.567
ENSECRP00000021947
annotation not available
    
  0.567
hapln1
Hyaluronan and proteoglycan link protein 1.
    
 0.564
fcer1g
Fc fragment of IgE receptor Ig.
   
 0.561
LOC114656302
Tyrosine-protein phosphatase non-receptor type 11-like.
    
  0.560
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
    
  0.560
ptpn11
Protein tyrosine phosphatase non-receptor type 11.
    
  0.560
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.