STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
epb41l5Erythrocyte membrane protein band 4.1 like 5. (783 aa)    
Predicted Functional Partners:
cask
Calcium/calmodulin dependent serine protein kinase.
   
 0.981
prkci
Protein kinase C iota.
    
 0.814
prkcz
Protein kinase C zeta.
    
 0.723
mpp5
Membrane palmitoylated protein 5.
 
  
 0.663
mpp1
Membrane palmitoylated protein 1.
 
  
 0.643
ENSECRP00000031035
annotation not available
 
   
 0.604
arhgef18
Rho/Rac guanine nucleotide exchange factor 18.
     
 0.579
arhgef28
Rho guanine nucleotide exchange factor 28.
     
 0.579
akap13
A-kinase anchoring protein 13.
     
 0.579
mpp2
Membrane palmitoylated protein 2.
 
  
 0.562
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.