STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000024491annotation not available (353 aa)    
Predicted Functional Partners:
porcn
Porcupine O-acyltransferase.
    
 0.934
fzd2
Frizzled class receptor 2.
    
 0.924
sfrp1
Secreted frizzled related protein 1.
    
 0.919
sfrp5
Secreted frizzled related protein 5.
    
 0.919
fzd4
Frizzled class receptor 4.
    
 0.916
fzd7
Frizzled class receptor 7.
    
 0.916
ENSECRP00000021959
annotation not available
    
 0.916
fzd8
Frizzled class receptor 8.
    
 0.909
fzd5
Frizzled class receptor 5.
    
 0.908
lrp5
LDL receptor related protein 5.
    
 0.906
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.