STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
poc5POC5 centriolar protein. (547 aa)    
Predicted Functional Partners:
cetn3
Centrin 3.
    
 
 0.906
wdr53
WD repeat domain 53.
   
    0.699
LOC114651930
Caltractin.
    
 
 0.667
cetn2
Centrin 2.
    
 
 0.667
ENSECRP00000033468
annotation not available
    
 
 0.667
fam161a
FAM161 centrosomal protein A.
    
 
 0.636
crppa
CDP-L-ribitol pyrophosphorylase A.
    
 
 0.576
ENSECRP00000025927
annotation not available
    
 
 0.576
iars2
isoleucyl-tRNA synthetase 2, mitochondrial.
      
 0.532
sfi1
SFI1 centrin binding protein.
      
 0.524
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.