STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
timm29Translocase of inner mitochondrial membrane 29. (243 aa)    
Predicted Functional Partners:
agk
Acylglycerol kinase.
    
 0.997
timm10
Translocase of inner mitochondrial membrane 10.
   
 0.996
timm9
Translocase of inner mitochondrial membrane 9.
   
 0.996
timm22
Translocase of inner mitochondrial membrane 22.
   
 0.992
ENSECRP00000005620
annotation not available
   
 0.970
ENSECRP00000011333
annotation not available
   
 0.970
cactin
Cactin, spliceosome C complex subunit.
   
 0.934
cerk
Ceramide kinase.
    
 0.802
cerkl
Ceramide kinase like.
    
 0.802
LOC114660623
Ceramide kinase-like.
    
 0.802
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.