STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sv2cSynaptic vesicle glycoprotein 2C. (713 aa)    
Predicted Functional Partners:
lamc2
Laminin subunit gamma 2.
     
 0.858
lamb3
Laminin subunit beta 3.
     
 0.856
ENSECRP00000001713
annotation not available
     
 0.844
lama2
Laminin subunit alpha 2.
     
 0.843
lamb2
Laminin subunit beta 2.
     
 0.842
lamc1
Laminin subunit gamma 1.
     
 0.834
ENSECRP00000020832
annotation not available
     
 0.834
pla2g4a
Phospholipase A2 group IVA.
    
 0.760
ENSECRP00000008612
annotation not available
     
 0.695
ENSECRP00000008636
annotation not available
     
 0.695
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.