STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbxw11F-box and WD repeat domain containing 11. (595 aa)    
Predicted Functional Partners:
skp1
S-phase kinase associated protein 1.
    
 0.989
rbx1
Ring-box 1.
    
 0.978
ctnnb1
Catenin beta 1.
    
 0.977
cul1
Cullin 1.
    
 0.975
ENSECRP00000025350
annotation not available
    
 0.956
cul3
Cullin 3.
   
 0.950
nfkbia
NFKB inhibitor alpha.
    
 0.942
jup
Junction plakoglobin.
    
 0.940
gli3
GLI family zinc finger 3.
    
 0.925
gli1
GLI family zinc finger 1.
    
 0.925
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.