STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114656149C-X-C chemokine receptor type 1-like. (353 aa)    
Predicted Functional Partners:
ENSECRP00000013108
annotation not available
   
 0.978
cxcl12
C-X-C motif chemokine ligand 12.
    
 0.904
cxcr4
C-X-C motif chemokine receptor 4.
   
 
0.888
grk7
G protein-coupled receptor kinase 7.
    
 0.880
LOC114650253
G protein-coupled receptor kinase 5-like.
    
 0.877
grk1
G protein-coupled receptor kinase 1.
    
 0.877
LOC114649560
Rhodopsin kinase-like.
    
 0.877
ENSECRP00000012667
annotation not available
   
 0.874
LOC114657243
C-C motif chemokine 3-like.
   
 0.872
arrb2
Arrestin beta 2.
   
 0.871
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.