STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114665808Isoaspartyl peptidase/L-asparaginase-like. (310 aa)    
Predicted Functional Partners:
asns
Asparagine synthetase (glutamine-hydrolyzing).
     
 0.879
LOC114657895
Adenylosuccinate synthetase isozyme 2-like.
    
  0.858
adss2
Adenylosuccinate synthase 2.
    
  0.858
got2
Glutamic-oxaloacetic transaminase 2.
   
 
 0.856
LOC114653478
Glutamate decarboxylase 1-like.
     
 0.849
gad2
Glutamate decarboxylase 2.
     
 0.849
gad1
Glutamate decarboxylase 1.
     
 0.849
LOC114666048
Isoaspartyl peptidase/L-asparaginase-like.
  
  
 
0.847
cad
Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.
    
  0.845
ftcd
Formimidoyltransferase cyclodeaminase.
     
 0.845
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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