STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc3a1Solute carrier family 3 member 1. (669 aa)    
Predicted Functional Partners:
slc7a9
Solute carrier family 7 member 9.
  
 0.944
ENSECRP00000006045
annotation not available
  
 0.918
ENSECRP00000006047
annotation not available
  
 0.918
ENSECRP00000006052
annotation not available
  
 0.918
LOC114653859
B(0,+)-type amino acid transporter 1-like.
  
 0.918
gbe1
1,4-alpha-glucan branching enzyme 1.
  
 
 0.866
agl
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase.
   
 0.815
pudp
Pseudouridine 5'-phosphatase.
  
 
 0.796
pgghg
Protein-glucosylgalactosylhydroxylysine glucosidase.
  
 
 0.790
yipf6
Yip1 domain family member 6.
  
 
 0.786
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.