STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
inpp5bInositol polyphosphate-5-phosphatase B. (914 aa)    
Predicted Functional Partners:
sacm1l
SAC1 like phosphatidylinositide phosphatase.
 
  
 0.989
ENSECRP00000021936
annotation not available
 
  
 0.971
pheta1
PH domain containing endocytic trafficking adaptor 1.
    
 
 0.885
inpp4a
Inositol polyphosphate-4-phosphatase type I A.
     
 0.873
LOC114644828
Type II inositol 3,4-bisphosphate 4-phosphatase-like.
     
 0.873
pi4kb
Phosphatidylinositol 4-kinase beta.
     
 0.872
pi4ka
Phosphatidylinositol 4-kinase alpha.
     
 0.868
plcg1
Phospholipase C gamma 1.
    
 0.863
LOC114653748
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1-like.
    
 0.863
LOC114658113
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2-like.
    
 0.863
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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