STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114661415Chitobiosyldiphosphodolichol beta-mannosyltransferase-like. (349 aa)    
Predicted Functional Partners:
gmppb
GDP-mannose pyrophosphorylase B.
  
 0.958
dpm1
Dolichyl-phosphate mannosyltransferase subunit 1, catalytic.
  
 
 0.947
alg2
ALG2 alpha-1,3/1,6-mannosyltransferase.
    
 0.943
LOC114662350
UDP-N-acetylglucosamine transferase subunit ALG13 homolog.
    
 0.938
LOC114662573
Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13.
    
 0.934
alg14
ALG14 UDP-N-acetylglucosaminyltransferase subunit.
   
 
 0.932
gmds
GDP-mannose 4,6-dehydratase.
  
 
 0.903
dpm3
Dolichyl-phosphate mannosyltransferase subunit 3, regulatory.
     
 0.900
gmppa
GDP-mannose pyrophosphorylase A.
  
 0.900
gbe1
1,4-alpha-glucan branching enzyme 1.
  
 0.898
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.