STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000025301annotation not available (818 aa)    
Predicted Functional Partners:
ENSECRP00000027989
annotation not available
    
 0.999
rims2
Regulating synaptic membrane exocytosis 2.
    
 0.999
unc13c
Unc-13 homolog C.
 
     0.942
rims3
Regulating synaptic membrane exocytosis 3.
    
 0.836
rims1
Regulating synaptic membrane exocytosis 1.
    
 0.836
rims4
Regulating synaptic membrane exocytosis 4.
    
 0.757
tspoap1
TSPO associated protein 1.
   
 0.741
rimbp2
RIMS binding protein 2.
   
 0.741
ENSECRP00000002974
annotation not available
    
 0.709
stxbp1
Syntaxin binding protein 1.
    
 0.709
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.