STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000025542annotation not available (463 aa)    
Predicted Functional Partners:
lss
Lanosterol synthase.
  
 0.914
hsd3b7
Hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7.
  
 0.889
ENSECRP00000000413
annotation not available
  
 0.853
ch25h
Cholesterol 25-hydroxylase.
  
 0.853
ENSECRP00000007288
annotation not available
  
 0.853
LOC114654182
Cholesterol 25-hydroxylase-like protein 2.
  
 0.853
msmo1
Methylsterol monooxygenase 1.
  
 0.853
faxdc2
Fatty acid hydroxylase domain containing 2.
  
 0.853
LOC114650861
3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase-like.
  
 0.849
ptges3l
Prostaglandin E synthase 3 like.
    
 0.840
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.