STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhoqRas homolog family member Q. (205 aa)    
Predicted Functional Partners:
itsn2
Intersectin 2.
    
 0.998
itsn1
Intersectin 1.
    
 0.969
exoc7
Exocyst complex component 7.
    
 0.918
trip10
Thyroid hormone receptor interactor 10.
    
 0.897
rapgef1
Rap guanine nucleotide exchange factor 1.
    
 0.889
ENSECRP00000011256
annotation not available
   
 0.882
ENSECRP00000023353
annotation not available
    
 0.853
myo9a
Myosin IXA.
    
 0.853
baiap2
BAR/IMD domain containing adaptor protein 2.
   
 0.842
shank3
SH3 and multiple ankyrin repeat domains 3.
   
  0.836
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.