STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dlstDihydrolipoamide S-succinyltransferase. (466 aa)    
Predicted Functional Partners:
ogdh
Oxoglutarate dehydrogenase.
 0.999
dld
Dihydrolipoamide dehydrogenase.
 0.999
bckdhb
Branched chain keto acid dehydrogenase E1 subunit beta.
 0.998
bckdha
Branched chain keto acid dehydrogenase E1 subunit alpha.
 
 0.998
dhtkd1
Dehydrogenase E1 and transketolase domain containing 1.
 0.997
suclg1
succinate-CoA ligase alpha subunit.
 
 0.996
sucla2
succinate-CoA ligase ADP-forming beta subunit.
 
 0.993
pdhb
Pyruvate dehydrogenase E1 beta subunit.
 0.993
cs
Citrate synthase.
  
 0.990
suclg2
succinate-CoA ligase GDP-forming beta subunit.
 
 0.989
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.