STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl38Ribosomal protein L38. (70 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.999
LOC114666740
Ubiquitin-like protein FUBI.
   
 0.999
rpl31
Ribosomal protein L31.
   
 0.998
rps21
Ribosomal protein S21.
   
 0.998
rpl8
Ribosomal protein L8.
   
 0.998
rpl11
Ribosomal protein L11.
   
 0.998
rpl39
Ribosomal protein L39.
   
 0.998
rps26
Ribosomal protein S26.
   
 0.998
rpl32
Ribosomal protein L32.
   
 0.998
rpl18a
Ribosomal protein L18a.
   
 0.997
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.