STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114661037Hemoglobin cathodic subunit beta-like. (147 aa)    
Predicted Functional Partners:
ENSECRP00000026132
annotation not available
  
0.920
hbz
Hemoglobin subunit zeta.
  
0.912
LOC114661038
Hemoglobin subunit alpha-like.
  
0.857
LOC114648548
Cytochrome b5 reductase 4.
   
 0.681
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
    
  0.505
LOC114666740
Ubiquitin-like protein FUBI.
    
  0.505
LOC114667284
Apolipoprotein A-IV-like.
   
 0.448
eif3j
Eukaryotic translation initiation factor 3 subunit J.
    
 
 0.415
apob
Apolipoprotein B.
   
 
 0.401
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.