STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnai2Dynein axonemal intermediate chain 2. (602 aa)    
Predicted Functional Partners:
LOC114656119
Thioredoxin domain-containing protein 3 homolog.
    
 0.967
ENSECRP00000011985
annotation not available
    
 0.902
dnai1
Dynein axonemal intermediate chain 1.
   
 
0.877
ccdc103
Coiled-coil domain containing 103.
   
 
 0.867
dnal4
Dynein axonemal light chain 4.
    
 0.865
ENSECRP00000023634
annotation not available
    
 0.865
dctn2
Dynactin subunit 2.
    
 0.860
dnal1
Dynein axonemal light chain 1.
    
 0.852
ccdc65
Coiled-coil domain containing 65.
   
 
 0.849
drc1
Dynein regulatory complex subunit 1.
   
 
 0.830
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.