STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114651692WW domain binding protein 1-like. (391 aa)    
Predicted Functional Partners:
ruvbl1
RuvB like AAA ATPase 1.
    
 0.977
ruvbl2
RuvB like AAA ATPase 2.
    
 0.976
actr5
Actin related protein 5.
    
 0.968
ino80c
INO80 complex subunit C.
    
 0.955
actr8
Actin related protein 8.
    
 0.904
actl6b
Actin like 6B.
    
 0.824
actl6a
Actin like 6A.
    
 0.824
ino80
INO80 complex ATPase subunit.
    
  0.823
tfpt
TCF3 fusion partner.
   
  0.812
yeats4
YEATS domain containing 4.
    
 0.793
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.