STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
specc1lSperm antigen with calponin homology and coiled-coil domains 1 like. (1105 aa)    
Predicted Functional Partners:
ENSECRP00000009191
annotation not available
     
 0.739
myo3b
Myosin IIIB.
     
 0.739
LOC114654330
myosin-IIIb-like.
     
 0.739
LOC114652011
EH domain-binding protein 1-like protein 1.
   
 
0.649
ehbp1
EH domain binding protein 1.
   
 
0.649
ENSECRP00000030575
annotation not available
    
  0.613
ENSECRP00000030600
annotation not available
    
 
0.613
myo1b
Myosin IB.
    
  0.582
myo1c
Myosin IC.
    
  0.520
clmn
Calmin.
    
 
0.476
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.