STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phka1Phosphorylase kinase regulatory subunit alpha 1. (1236 aa)    
Predicted Functional Partners:
phkg1
Phosphorylase kinase catalytic subunit gamma 1.
   
 0.952
phkg2
Phosphorylase kinase catalytic subunit gamma 2.
   
 0.952
phkb
Phosphorylase kinase regulatory subunit beta.
  
0.914
ENSECRP00000028915
annotation not available
    
  0.874
calml6
Calmodulin like 6.
    
  0.873
pygl
Glycogen phosphorylase L.
   
 
 0.866
ppp1r3f
Protein phosphatase 1 regulatory subunit 3F.
   
 
  0.845
phka2
Phosphorylase kinase regulatory subunit alpha 2.
  
  
 
0.844
ppp1r3b
Protein phosphatase 1 regulatory subunit 3B.
     
 0.842
ppp1r3c
Protein phosphatase 1 regulatory subunit 3C.
     
 0.842
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.