STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114661048Cytochrome c oxidase subunit 6B1. (86 aa)    
Predicted Functional Partners:
LOC114654278
Cytochrome c oxidase subunit 7C, mitochondrial.
   
 0.991
LOC114667733
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 0.991
LOC114663488
Cytochrome b-c1 complex subunit 7.
   
 0.990
LOC114668931
Cytochrome b-c1 complex subunit 9.
   
 0.988
LOC114660216
Cytochrome b-c1 complex subunit 8.
   
 0.987
LOC114659506
Cytochrome c oxidase subunit 6C.
   
 0.987
LOC114662794
Cytochrome b-c1 complex subunit 10.
   
 0.982
LOC114659398
Cytochrome c1, heme protein, mitochondrial.
   
 0.975
LOC114661058
Cytochrome b-c1 complex subunit 2, mitochondrial.
   
 0.975
LOC114659175
Cytochrome b-c1 complex subunit 6, mitochondrial.
   
 0.975
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.