STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cgasCyclic GMP-AMP synthase. (559 aa)    
Predicted Functional Partners:
ifi30
IFI30 lysosomal thiol reductase.
    
  0.869
sting1
Stimulator of interferon response cGAMP interactor 1.
  
 
 0.791
thrsp
Thyroid hormone responsive.
    
  0.673
irf3
Interferon regulatory factor 3.
      
 0.563
tbk1
TANK binding kinase 1.
      
 0.556
LOC114643661
Mitochondrial antiviral-signaling protein-like.
      
 0.459
ddx41
DEAD-box helicase 41.
      
 0.443
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.