STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000026452annotation not available (163 aa)    
Predicted Functional Partners:
gart
annotation not available
    
  0.876
LOC114648548
Cytochrome b5 reductase 4.
    
  0.844
nanp
N-acetylneuraminic acid phosphatase.
    
 0.572
cmas
Cytidine monophosphate N-acetylneuraminic acid synthetase.
     
 0.570
ENSECRP00000020420
annotation not available
    
  0.569
LOC114642117
Amidophosphoribosyltransferase-like.
    
  0.569
ENSECRP00000009730
annotation not available
    
  0.559
LOC114646514
NAD kinase-like.
    
  0.559
l2hgdh
L-2-hydroxyglutarate dehydrogenase.
    
  0.542
ndufv2
NADH:ubiquinone oxidoreductase core subunit V2.
    
  0.532
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.