STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114642104Midasin-like. (4847 aa)    
Predicted Functional Partners:
wdr12
WD repeat domain 12.
   
 0.998
gtpbp4
GTP binding protein 4.
   
 0.994
gnl2
G protein nucleolar 2.
   
 0.991
mrto4
MRT4 homolog, ribosome maturation factor.
   
 0.990
nsa2
NSA2 ribosome biogenesis factor.
    
 0.987
nle1
Notchless homolog 1.
   
 0.983
znf593
Zinc finger protein 593.
   
 0.982
eif6
Eukaryotic translation initiation factor 6.
   
 0.981
pes1
Pescadillo ribosomal biogenesis factor 1.
   
 0.980
rsl24d1
Ribosomal L24 domain containing 1.
   
 0.976
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.