STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000026555annotation not available (1634 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.930
LOC114666740
Ubiquitin-like protein FUBI.
   
  0.930
fras1
Fraser extracellular matrix complex subunit 1.
    
  0.715
frem1
FRAS1 related extracellular matrix 1.
    
 0.702
LOC114659815
FRAS1-related extracellular matrix protein 1-like.
    
 0.702
ENSECRP00000022527
annotation not available
    
 0.702
ENSECRP00000030381
annotation not available
    
 0.702
gle1
GLE1 RNA export mediator.
    
 0.697
rps15
Ribosomal protein S15.
   
  0.675
rps14
Ribosomal protein S14.
   
 0.671
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.