STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnah7Dynein axonemal heavy chain 7. (3871 aa)    
Predicted Functional Partners:
ENSECRP00000011985
annotation not available
    
 0.887
LOC114656119
Thioredoxin domain-containing protein 3 homolog.
    
 0.877
pafah1b1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
    
 0.730
tbc1d31
TBC1 domain family member 31.
    
 0.730
dnai1
Dynein axonemal intermediate chain 1.
   
 0.729
dctn2
Dynactin subunit 2.
    
 0.694
wdr78
WD repeat domain 78.
   
 0.682
dnal4
Dynein axonemal light chain 4.
    
 0.673
ENSECRP00000023634
annotation not available
    
 0.673
wdr63
WD repeat domain 63.
   
 0.668
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.