STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
myl1Myosin light chain 1. (189 aa)    
Predicted Functional Partners:
mylpf
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.991
LOC114653424
Myosin regulatory light chain 2, smooth muscle minor isoform.
   
0.990
LOC114659546
Myosin regulatory light polypeptide 9.
   
0.990
tnni2
Troponin I2, fast skeletal type.
   
 0.975
ENSECRP00000004213
annotation not available
   
 0.975
myl7
Myosin light chain 7.
   
 0.973
neb
Nebulin.
   
 
 0.973
LOC114659385
Troponin C, skeletal muscle.
  
 
0.963
LOC114665161
Putative uncharacterized protein MYH16.
   
 0.947
LOC114661187
Myosin-16.
   
 0.947
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.