STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000027015annotation not available (1041 aa)    
Predicted Functional Partners:
bcl7c
BAF chromatin remodeling complex subunit BCL7C.
    
 0.975
pbrm1
Polybromo 1.
   
 0.967
arid2
AT-rich interaction domain 2.
   
 0.965
bcl7a
BAF chromatin remodeling complex subunit BCL7A.
    
 0.965
smarcb1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
    
 0.961
smarce1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.
    
 0.956
bcl7b
BAF chromatin remodeling complex subunit BCL7B.
    
 0.953
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.930
LOC114666740
Ubiquitin-like protein FUBI.
   
  0.930
phf10
PHD finger protein 10.
    
 0.900
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.