STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpainRPA interacting protein. (223 aa)    
Predicted Functional Partners:
rpa1
Replication protein A1.
    
   0.767
espl1
Extra spindle pole bodies like 1, separase.
    
 0.635
ripk4
Receptor interacting serine/threonine kinase 4.
    
 0.604
plk2
Polo like kinase 2.
    
 0.597
plk3
Polo like kinase 3.
    
 0.597
plk4
Polo like kinase 4.
    
 0.597
ckap5
Cytoskeleton associated protein 5.
    
 
 0.563
dag1
Dystroglycan 1.
    
 0.543
erbb3
Erb-b2 receptor tyrosine kinase 3.
    
 0.531
erbb4
Erb-b2 receptor tyrosine kinase 4.
    
 0.531
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.