STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
maeaMacrophage erythroblast attacher. (405 aa)    
Predicted Functional Partners:
LOC114644745
Armadillo repeat-containing protein 8-like.
    
 0.988
wdr26
WD repeat domain 26.
    
 0.985
rmnd5b
Required for meiotic nuclear division 5 homolog B.
    
0.925
rmnd5a
Required for meiotic nuclear division 5 homolog A.
    
0.925
gid8
GID complex subunit 8 homolog.
  
 
 
 0.839
ranbp10
RAN binding protein 10.
    
 
 0.760
ranbp9
RAN binding protein 9.
    
 
 0.760
mkln1
Muskelin 1.
    
 
 0.757
eif3f
Eukaryotic translation initiation factor 3 subunit F.
    
  0.734
eif3b
Eukaryotic translation initiation factor 3 subunit B.
   
 
  0.720
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.