STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl14Ribosomal protein L14. (140 aa)    
Predicted Functional Partners:
rps5
Ribosomal protein S5.
  
 0.999
rps3
Ribosomal protein S3.
  
 0.999
rpl18a
Ribosomal protein L18a.
   
 0.999
rps10
Ribosomal protein S10.
   
 0.999
rps12
Ribosomal protein S12.
  
 0.999
rps13
Ribosomal protein S13.
  
 0.999
rpl31
Ribosomal protein L31.
   
 0.999
rpl35a
Ribosomal protein L35a.
   
 0.999
rps20
Ribosomal protein S20.
  
 0.999
rps3a
Ribosomal protein S3A.
   
 0.999
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.