STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cep19Centrosomal protein 19. (159 aa)    
Predicted Functional Partners:
fgfr1op
FGFR1 oncogene partner.
    
 
 0.852
rabl2b
RAB, member of RAS oncogene family like 2B.
    
 
 0.827
cep350
Centrosomal protein 350.
    
 
 0.726
ubxn7
UBX domain protein 7.
      
 0.562
sclt1
Sodium channel and clathrin linker 1.
    
 
 0.553
rab25
RAB25, member RAS oncogene family.
    
 
 0.524
LOC114646103
Ras-related protein Rab-11A-like.
    
 
 0.524
LOC114662823
Ras-related protein Rab-11B-like.
    
 
 0.524
rab8a
RAB11B, member RAS oncogene family.
    
 
 0.524
acp2
Acid phosphatase 2, lysosomal.
    
 
 0.488
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.