STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fzd6Frizzled class receptor 6. (716 aa)    
Predicted Functional Partners:
wnt11
Wnt family member 11.
    
 0.939
wnt4
Wnt family member 4.
    
 0.939
LOC114663075
Protein Wnt-11b-2-like.
    
 0.938
wnt5a
Wnt family member 5A.
    
 0.937
LOC114658017
Protein Wnt-4-like.
    
 0.929
dvl2
Dishevelled segment polarity protein 2.
    
 0.929
wnt16
Wnt family member 16.
    
 0.925
wnt6
Wnt family member 6.
    
 0.922
wnt3a
Wnt family member 3A.
    
 0.921
wnt7b
Wnt family member 7B.
    
 0.921
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.