STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kirrel3Kirre like nephrin family adhesion molecule 3. (774 aa)    
Predicted Functional Partners:
nphs1
NPHS1 adhesion molecule, nephrin.
   
0.955
nck2
NCK adaptor protein 2.
    
 0.697
nck1
NCK adaptor protein 1.
    
 0.697
tjp1
Tight junction protein 1.
    
 0.578
fyn
FYN proto-oncogene, Src family tyrosine kinase.
    
  0.541
LOC114659291
Tyrosine-protein kinase SRK2-like.
    
  0.541
LOC114659292
Protein-tyrosine kinase 6-like.
    
  0.541
fgr
FGR proto-oncogene, Src family tyrosine kinase.
    
  0.541
abcc5
ATP binding cassette subfamily C member 5.
   
 0.519
abcc12
ATP binding cassette subfamily C member 12.
   
 0.519
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.