STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000027918annotation not available (292 aa)    
Predicted Functional Partners:
ENSECRP00000012604
annotation not available
 
      0.899
ENSECRP00000012620
annotation not available
 
      0.893
dolk
Dolichol kinase.
    
 0.722
mboat2
Membrane bound O-acyltransferase domain containing 2.
     
 0.606
lcat
Lecithin-cholesterol acyltransferase.
    
 0.585
pla2g15
Phospholipase A2 group XV.
    
 0.585
timm50
Translocase of inner mitochondrial membrane 50.
    
 0.566
ctdspl
CTD small phosphatase like.
    
 0.566
ctdnep1
CTD nuclear envelope phosphatase 1.
    
 0.566
ublcp1
Ubiquitin like domain containing CTD phosphatase 1.
    
 0.566
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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