STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114665477alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2-like. (463 aa)    
Predicted Functional Partners:
LOC114659490
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1-like.
  
  
0.683
st3gal1
ST3 beta-galactoside alpha-2,3-sialyltransferase 1.
  
  
0.678
LOC114649201
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-A-like.
    
 0.666
LOC114664969
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like.
    
 0.666
LOC114654968
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B-like.
    
 0.666
st3gal2
ST3 beta-galactoside alpha-2,3-sialyltransferase 2.
  
  
0.653
nelfa
Negative elongation factor complex member A.
    
 0.606
galnt16
Polypeptide N-acetylgalactosaminyltransferase 16.
     
 0.577
galnt2
Polypeptide N-acetylgalactosaminyltransferase 2.
     
 0.558
galnt3
Polypeptide N-acetylgalactosaminyltransferase 3.
     
 0.479
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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