STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000028187annotation not available (216 aa)    
Predicted Functional Partners:
LOC114649553
Claudin-15-like.
  
  
 0.892
cdc6
Cell division cycle 6.
   
 0.883
tjp3
Tight junction protein 3.
    
 0.879
cldn11
Claudin 11.
     
 0.868
tjp1
Tight junction protein 1.
    
 0.865
pard3
Par-3 family cell polarity regulator.
   
  0.860
ENSECRP00000011061
annotation not available
   
 0.858
ENSECRP00000010690
annotation not available
     
 0.856
cldn20
Claudin 20.
  
  
0.852
cldn7
Claudin 7.
  
  
 
0.850
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.