STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000028370annotation not available (150 aa)    
Predicted Functional Partners:
ENSECRP00000008398
annotation not available
   
 0.973
LOC114649865
Interleukin-18 receptor 1-like.
   
 0.973
LOC114654472
Transcription factor AP-1-like.
     
 0.705
ENSECRP00000017429
annotation not available
     
 0.705
junb
JunB proto-oncogene, AP-1 transcription factor subunit.
     
 0.705
jun
Jun proto-oncogene, AP-1 transcription factor subunit.
     
 0.705
LOC114648612
Interleukin-1 beta-like.
   
 0.702
il10
Interleukin 10.
   
 
 0.680
LOC114650764
Interleukin-1 receptor type 1-like.
     
 0.656
LOC114650765
Interleukin-1 receptor type 1-like.
     
 0.656
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.