STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000028429annotation not available (155 aa)    
Predicted Functional Partners:
chchd6
Coiled-coil-helix-coiled-coil-helix domain containing 6.
   
 0.900
chchd3
Coiled-coil-helix-coiled-coil-helix domain containing 3.
   
 0.879
immt
Inner membrane mitochondrial protein.
    
 0.813
apoo
Apolipoprotein O.
   
 
 0.793
dnajc11
DnaJ heat shock protein family (Hsp40) member C11.
   
 
 0.782
apool
Apolipoprotein O like.
   
 
 0.781
micos13
Mitochondrial contact site and cristae organizing system subunit 13.
   
 
 0.780
micos10
Mitochondrial contact site and cristae organizing system subunit 10.
     
 0.755
tardbp
TAR DNA binding protein.
    
 0.679
ENSECRP00000018277
annotation not available
    
 0.679
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.