STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnajc17DnaJ heat shock protein family (Hsp40) member C17. (310 aa)    
Predicted Functional Partners:
cdc5l
Cell division cycle 5 like.
    
 
 0.921
ENSECRP00000033051
annotation not available
    
 
 0.921
dctn2
Dynactin subunit 2.
    
 0.729
tfpt
TCF3 fusion partner.
   
    0.716
dctn4
Dynactin subunit 4.
    
 0.704
dctn6
Dynactin subunit 6.
    
 0.657
ibtk
Inhibitor of Bruton tyrosine kinase.
      
 0.578
LOC114662932
Amyloid-beta A4 precursor protein-binding family A member 3-like.
      
 0.554
pa2g4
Proliferation-associated 2G4.
    
  0.553
xab2
XPA binding protein 2.
   
 
 0.547
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.