STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ciapin1Cytokine induced apoptosis inhibitor 1. (295 aa)    
Predicted Functional Partners:
ndor1
NADPH dependent diflavin oxidoreductase 1.
    
 0.996
glrx3
Glutaredoxin 3.
    
 
 0.979
mms19
MMS19 homolog, cytosolic iron-sulfur assembly component.
     
 0.953
ciao1
Cytosolic iron-sulfur assembly component 1.
     
 0.953
LOC114649058
bolA-like protein 2.
    
 
 0.907
ENSECRP00000002113
annotation not available
    
 
 0.903
LOC114655794
NADPH--cytochrome P450 reductase.
    
 0.892
mtrr
5-methyltetrahydrofolate-homocysteine methyltransferase reductase.
    
 0.892
nos2
Nitric oxide synthase 2.
    
 0.892
LOC114663801
Nitric oxide synthase, endothelial-like.
    
 0.892
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.