Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC114668320 | nedd8 | ENSECRP00000027272 | ENSECRP00000018687 | Cullin-associated NEDD8-dissociated protein 1-like. | NEDD8 ubiquitin like modifier. | 0.808 |
LOC114668320 | neurl1b | ENSECRP00000027272 | ENSECRP00000028626 | Cullin-associated NEDD8-dissociated protein 1-like. | Neuralized E3 ubiquitin protein ligase 1B. | 0.692 |
LOC114668320 | rps27a | ENSECRP00000027272 | ENSECRP00000026007 | Cullin-associated NEDD8-dissociated protein 1-like. | Ribosomal protein S27a. | 0.466 |
cand1 | nedd8 | ENSECRP00000001184 | ENSECRP00000018687 | Cullin associated and neddylation dissociated 1. | NEDD8 ubiquitin like modifier. | 0.808 |
cand1 | neurl1b | ENSECRP00000001184 | ENSECRP00000028626 | Cullin associated and neddylation dissociated 1. | Neuralized E3 ubiquitin protein ligase 1B. | 0.692 |
cand1 | rps27a | ENSECRP00000001184 | ENSECRP00000026007 | Cullin associated and neddylation dissociated 1. | Ribosomal protein S27a. | 0.466 |
epn1 | nedd8 | ENSECRP00000027249 | ENSECRP00000018687 | Epsin 1. | NEDD8 ubiquitin like modifier. | 0.575 |
epn1 | neurl1b | ENSECRP00000027249 | ENSECRP00000028626 | Epsin 1. | Neuralized E3 ubiquitin protein ligase 1B. | 0.673 |
epn1 | rps27a | ENSECRP00000027249 | ENSECRP00000026007 | Epsin 1. | Ribosomal protein S27a. | 0.737 |
epn2 | nedd8 | ENSECRP00000014418 | ENSECRP00000018687 | Epsin 2. | NEDD8 ubiquitin like modifier. | 0.575 |
epn2 | neurl1b | ENSECRP00000014418 | ENSECRP00000028626 | Epsin 2. | Neuralized E3 ubiquitin protein ligase 1B. | 0.673 |
epn2 | rps27a | ENSECRP00000014418 | ENSECRP00000026007 | Epsin 2. | Ribosomal protein S27a. | 0.737 |
epn3 | nedd8 | ENSECRP00000034055 | ENSECRP00000018687 | Epsin 3. | NEDD8 ubiquitin like modifier. | 0.575 |
epn3 | neurl1b | ENSECRP00000034055 | ENSECRP00000028626 | Epsin 3. | Neuralized E3 ubiquitin protein ligase 1B. | 0.673 |
epn3 | rps27a | ENSECRP00000034055 | ENSECRP00000026007 | Epsin 3. | Ribosomal protein S27a. | 0.737 |
mib2 | nbr1 | ENSECRP00000029626 | ENSECRP00000028993 | Mindbomb E3 ubiquitin protein ligase 2. | NBR1 autophagy cargo receptor. | 0.879 |
mib2 | nedd8 | ENSECRP00000029626 | ENSECRP00000018687 | Mindbomb E3 ubiquitin protein ligase 2. | NEDD8 ubiquitin like modifier. | 0.869 |
mib2 | neurl1b | ENSECRP00000029626 | ENSECRP00000028626 | Mindbomb E3 ubiquitin protein ligase 2. | Neuralized E3 ubiquitin protein ligase 1B. | 0.902 |
mib2 | rps27a | ENSECRP00000029626 | ENSECRP00000026007 | Mindbomb E3 ubiquitin protein ligase 2. | Ribosomal protein S27a. | 0.998 |
nbr1 | mib2 | ENSECRP00000028993 | ENSECRP00000029626 | NBR1 autophagy cargo receptor. | Mindbomb E3 ubiquitin protein ligase 2. | 0.879 |
page 1 of 3