STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
foxred1FAD dependent oxidoreductase domain containing 1. (503 aa)    
Predicted Functional Partners:
ndufs5
NADH:ubiquinone oxidoreductase subunit S5.
    
 0.975
dmac2
Distal membrane arm assembly complex 2.
   
 
 0.971
ndufb10
NADH:ubiquinone oxidoreductase subunit B10.
    
 0.961
ndufs3
NADH:ubiquinone oxidoreductase core subunit S3.
    
 0.961
ndufs1
NADH:ubiquinone oxidoreductase core subunit S1.
     
 0.958
ndufs8
NADH:ubiquinone oxidoreductase core subunit S8.
     
 0.958
ndufs4
NADH:ubiquinone oxidoreductase subunit S4.
     
 0.958
ENSECRP00000033664
annotation not available
     
 0.958
ndufa8
NADH:ubiquinone oxidoreductase subunit A8.
    
 0.957
LOC114667105
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial-like.
     
 0.957
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.